Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905982.1_cds_XP_016456249.1_50103
CDS Infomation

[gene=LOC107780227] [db_xref=GeneID:107780227] [protein=tetrahydrocannabinolic acid synthase-like] [protein_id=XP_016456249.1] [location=complement(24748..26343)] [gbkey=CDS]
Sequence

ATGACAACTTTCAACAAGTTAACAATCTTTCTCTTTCTTTCAATTTGCCTTTCATCATCA
TGTGTTGCCTCAGCAAGCAGTCATGATCACTTTCTTGAATGCCTTTCTCACAAAACTATG
AGCTCAAGTTCAATGTCACAAGTCATCCACACACCTAAAAACTCATCATATTCCACCATT
TTGAACTCTTTTGAGAGTAATCTTAGGATAAGCTCCGACGTCAACCCCTCAATTATTATC
ACTCCTTTGGACGAAACTCAAATCCAAGCAGCTATGCATTGCTCCAAGAAACATGGCTTA
CAAATCAGAATTCGAAGTGGCGGACATGACTATGAGGGCCTTTCCTACATTTCTGAAACC
CCTTTTGTCATCATTGATCTTAGAAACCTAAGATCAATCTCCATTGACATCGAAAGCAAG
ACTGCTTGGATTCAAGCTGGCGCGACCCTAGGGGAAGTTTACTATAGAATCGCTGAAAAA
AGCAAAACATTGGCCTTTGTTGGTGGGGTTTGCCCTACTGTTGGTGTTGGAGGACACTTC
ACTGGTGGAGGCTACGGAATGATGTCTCGAAAATTCGGTCTTGCTGCTGATAATATTATT
GATGCTAAATTAATCGATGCCAATGGACGGATCCAATATCGAGAATCAATGGGGGAAGAC
CTCTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGCTTTGGTCTCATTATTTCATGGAAG
GTGAAATTACTTGACATTCCAGAAAAGGTGGCGGTCTTCAACGTGACACGAACGTTAGAA
CAAAATGCAACTCAACTTGTCTACAAATGGCAACATATCGCGGACAAAGTTGATGACAAT
CTCCTCCTCAGACTCTTCCTGAGGAGCAGTGAATCTCCATTTCAGCGCGGTCAAAGGACT
GTACACGCCTCTTTCACTACCATGTTCGTTGGAGGAGTGGATGAACTCCTCCACGAAATG
CAAAAGAGCTTCCCCGAACTAGGGTTGGCAAAAGAAGATTGCATTGAGATGAGTTGGATC
GAATCTATACCCTATTTTTTTGGTTTCCCAAGGGGCACATCACTTGACGTGTTACTAAAC
AGAAATATCACAGATAAAAAGGGATACTTCAAACGAAAATCAGACTATGTCCGACACCCT
ATTTCAATAAATGGTCTCAAAGGTATATGGAAACTATTCGACCAAATAGGCGAAAACTCG
GCAGAATTGATAATTAGTCCTTACGGAGGAAAGTTGAATGACTTCTCAGAATCTGAAACC
CCTTTCCCGCATAGAGCTGGAAATATATTCTCAATCCATTATGAGGTGATTTGGGAAAAA
AAAGAAAGTTCTAAAAAACATATAGCTTGGATTCAGAAGCTTTATGGATACATGGCTAAG
TATGTTTCAAACTCTCCTAGAGCTGCTTATTTCAACTACAGAGATCTTGATTTGGGAGTG
AACAACAAAGGAAATACAAGCTATACACAAGCAAAAATCTGGGGAGAGAAATACTTCAAG
AACAATTTTGATAGATTGGTGCAAGTGAAGACTAAAGTTGATCCAACAAATTTCTTTAGG
AATGAACAAAGTATTCCTCCTCTCATGGTAATTTAA

Peptide Sequence

PEP ID

XP_016456249.1
PEP Infomation

PREDICTED: tetrahydrocannabinolic acid synthase-like [Nicotiana tabacum]
Sequence

MTTFNKLTIFLFLSICLSSSCVASASSHDHFLECLSHKTMSSSSMSQVIHTPKNSSYSTI
LNSFESNLRISSDVNPSIIITPLDETQIQAAMHCSKKHGLQIRIRSGGHDYEGLSYISET
PFVIIDLRNLRSISIDIESKTAWIQAGATLGEVYYRIAEKSKTLAFVGGVCPTVGVGGHF
TGGGYGMMSRKFGLAADNIIDAKLIDANGRIQYRESMGEDLFWAIRGGGGTSFGLIISWK
VKLLDIPEKVAVFNVTRTLEQNATQLVYKWQHIADKVDDNLLLRLFLRSSESPFQRGQRT
VHASFTTMFVGGVDELLHEMQKSFPELGLAKEDCIEMSWIESIPYFFGFPRGTSLDVLLN
RNITDKKGYFKRKSDYVRHPISINGLKGIWKLFDQIGENSAELIISPYGGKLNDFSESET
PFPHRAGNIFSIHYEVIWEKKESSKKHIAWIQKLYGYMAKYVSNSPRAAYFNYRDLDLGV
NNKGNTSYTQAKIWGEKYFKNNFDRLVQVKTKVDPTNFFRNEQSIPPLMVI

Transcript Sequence

Gene sequence data has not been registered.